YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|22326823, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVYFQNSISL VDQSPIMAHS PDFHHHSKQS RTSSSNRKSS SSSCSSNFSV CCDGSRSAAI  60
   61 DVVILIAVIT SSGFLIFPYI KFITIKSVEI FSELSCLVKE EILRNPDPIV YGLIALSISC 120
  121 TALSAWMIVI LLCSRHRCGK PNCKGLRKAN AEFDIQLETE DCVKSSNSGK SVSKKGLFEL 180
  181 PRDHHRELEA ELKKMAPPNG RAVLVFRAKC GCSVGRLEVP GPKKQQLQQR KVKK

Type	Start	End	Confidence
Cytoplasmic	1	61	0.94
Transmembrane Helix	62	82	0.89
Non-Cytoplasmic	83	110	0.92
Transmembrane Helix	111	132	0.92
Cytoplasmic	133	234	0.96