YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|4731374
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASLFPVLLV LALAFGSTLS IPIKEKDLES EDSLWSLYER WRSHHAVSRD LDQKQKRFNV  60
   61 FKENVKFIHE FNKNKDVTFK LALNKFGDMT NQEFRAKYAG SKVHHHRTMK GSRHGSGSGA 120
  121 KFMYENAVAP PSIDWRERGA VAAVKNQGQC GSCWAFSAIA AVEGINQIVT KELVPLSEQE 180
  181 LIDCDTDQNQ GCSGGLMDYA FEFIKNNGGI TTEDVYPYQA EDATCKKNSP AVVIDGYEDV 240
  241 PTNDEDALMK AVANQPVAVA IEASGYVFQF YSEGVFTGRC GTELDHGVAV VGYGTTQDGT 300
  301 KYWTVRNSWG ADWGESGYVR MQRGIKATHG LCGIAMQASY PIKTSLNPGM DSLKDEL

Type	Start	End	Confidence
Signal Peptide	1	20	0.98
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	357	0.99