YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|6048416
Protein type:	Transmembrane
Type Confidence:	0.71
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKTLKLISN ILYAVIFSLI IVLTLTVIST RASGGEPAIF GYTLKSVLSG SMDPEFKTGS  60
   61 LIAVKKISDV NDLKKGDVIT FTQDDGSVVT HRIIGITKKG GRLLFETKGD HNAAPDAAPV 120
  121 QAEKVAAQYT GYQLPYAGYV IHLASQPIGT AILLIVPGVM LLIYSITVIA SALRDIERKT 180
  181 KALEEHERNG TMST

Type	Start	End	Confidence
Cytoplasmic	1	9	0.64
Transmembrane Helix	10	30	0.66
Non-Cytoplasmic	31	147	0.97
Transmembrane Helix	148	171	0.86
Cytoplasmic	172	194	0.93