YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CNBLA_ARATH
Protein type:	Transmembrane
Type Confidence:	0.59
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTGRPNNIL ALKISTRSSS LTVGEQFCAV FIPFFAIIDV LVSSVGQCFD CRSTSPRTCQ  60
   61 HADLERLARE SQFSVNEVEA LYELFKKLSC SIIDDGLIHK EELRLALFQA PYGENLFLDR 120
  121 VFDLFDEKKN GVIEFEEFIH ALSVFHPYAS IQEKTDFAFR LYDLRQTGFI EREEVQQMVS 180
  181 AILLESDMML SDELLTMIID KTFADADSDK DGKISKDEWN VYVHKHPSLL KNMTLPYLKD 240
  241 VTTAFPSFIF NTEVED

Type	Start	End	Confidence
Cytoplasmic	1	20	0.53
Transmembrane Helix	21	38	0.53
Non-Cytoplasmic	39	256	0.96