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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|6468017
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPFRLGLLL GAVLFVASAN GAVIENEVSS LNDLQREKRS GRGYSRGQTQ SQYLNFGKPE  60
   61 EDGKAEAEAT ENGSRSTVSG THGMGQAQSQ FSSGDCNGCS GYQTDYPSSG RILDASGSGG 120
  121 IGRPDSIISL PGGVGGQTGA GQPGYGSQPG IGGQTATGQP GYGSQLGVGA QAGAGQPGYG 180
  181 AQPGVGAQTG AGQPGYGSQT GIGGQTGAGQ PGYGSQPGIG GQTGAGQPGY GSQPGIGGQT 240
  241 GAGQPGYGSQ PGIGGQTGAG QPGYGSQPGI GGQTGAGQPG YGSQPGIGGQ TGAGQPGYGT 300
  301 QPGIGGQTGA GQPGYGSQPG IGGQTGAGQP GYGSQPGIGG QTGAGQPGYG TQPGIGGQTG 360
  361 AGQPGYGTQP GIGGQTGPGQ PGYGTQPGIG GQTGPGQPGY GSQPGIGGQT GAGQPGYGTQ 420
  421 PGIGGQTGAG QPGYGTQPGI GAQTGAGQPG YGTQPGIGGQ TGAGQPGYGT QPGIGVQTGA 480
  481 GQPGYGSQPG IGAQTGAGQP GYGSQPGIGG QTGAGQPGYG SQPGIGGQTG AGQPGYGTQP 540
  541 GIGAQTGAGQ PGYGSQPGIG GQTGAGQPGY GSQPGIGGQT GAGQPGYGTQ PGVGAQTGTG 600
  601 QPGYGSQPGV GTQIGAGQPG YGSQPGIGGQ TGAGQPGYGS QPGIGGQTGA AQPGYGTQPG 660
  661 VGAQTGTGQP GYGAQPGIGG QTGAGQPGYG RQPGIGGQTG PGQPGYGTQP GVGTQTGTGQ 720
  721 PGYGAQPGIG GQSGAGQPGY GSQPGIGGQT GGGQPGYGSQ IGGQTGAGQP SYGSQPGVGA 780
  781 QNGGGQPGYG TRPVIGGQTG AGQPGYGGQT GVGGSPGFLT QPGIGGISGP IGGKVGGGQS 840
  841 EAAKPGYWAQ PGIGGPSRYG SQPGIGDQTG AGQSGYGGQP GISGQTGGGQ PGYGGQATIS 900
  901 GLPGYGTQPG IGALTAVPGG HYGYETQPGI GGQTGTNQPG FGGQPGIGGQ TGAGQPGYGF 960
  961 IGQPGIGGQT GTSGRQPGYG TQPGIGGQTA AGQPGYGSQP GIGGQTGAGQ PGYGSQTGVG1020
 1021 GQIGAGQPGY GSQPGIGGQT GAGQPGYGAQ PGFGGQPGYG NQPGVGGQTG AGQPGYGSQP1080
 1081 GVGGQTGAGQ PGYGVIPGFG GQPGIGGQTA AGKPGYGGQP GIGGSPVYGT QQGTGGPSGI1140
 1141 SGGQPGYGTQ PGQTGAGQPG YGSLPGTGGQ ATAGQPGYGP GSQPGIGGAP VYGTQPGGGG1200
 1201 QTGVIGGQPG QIGDRVGQPG YGTQTGQIGA PGRYTDGSQT VPGAVGTGGV VAAGTSGADD1260
 1261 AFSQAESSIG DGQASASAQG KKNGGTAKTQ VSGTYSSGGT FSASAMTSDA DRAASAQVTG1320
 1321 NADGAVSQSQ GSGGPAQSQA QVQVAKDGGT KASSQSGGII QQSQSEVHAN DKGGLADAQS1380
 1381 SGPGQTSSQA QIGFRPGQEA NPIAANGGGQ ASSSSGTHSS QSSSQIHGTS SFGVSYHGAA1440
 1441 QSASGTKEQV ATYREANREL FNTISQFGNN ANAVTDRADA VYSGPALTDE SDRVPEAQLK1500
 1501 STKPKEEAEQ VVSKPDHPEP VQYDDEDEAD PDEYDEDEYY EEKPVKLEES PKSSTIVAPT1560
 1561 EATPRPKTYN QSSPTQSQQT VVVPVPGEKY QVVQKQNGKA TINAEPSTTE AIPPGFRGTV1620
 1621 NVEKKFHTKA LELHAPKGVE ITPDTSDEGP VRGDKPLRRA PDSYVTVTKS VTGSMDNTKN1680
 1681 PPQENKNFQS TYYTKSSTCG YFTFSCNIVY GANGRSKICR PKAPTNGKC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle