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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|14586439
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKLFIFCTA IMMAMELCAA EKIDLKSITS GAFSAEYISG INPIEGTDQY ASISSNRKQV  60
   61 IRYSFKTGKQ TAVLFDADKV GNGLVEEIDG YSISPDGKRL LIQTHTEYVY RRSFKAVFYL 120
  121 YDIKSKKLAK LSACENQQIP TWSPDGSKIA FVYNNNIYIT DGDHETQVTS DGKFNSIING 180
  181 LPDWVYEEEF GFNNAMAWAA DPKTLSWIKD DESRVKTYSL QIFKGLKPAN EEYSDYPGEY 240
  241 SYKYPKAGLD NSIVSVWTYN LTDKQTHQLP VPLDSEGYIP RIKTTADSHR IVVYTMPRHQ 300
  301 DVLNLYAVNP YNQNVKLMIK EQVEKCVKEE AMEGISFGKN TILLPSDRDG YMHLYLYDYN 360
  361 GKLLRKVEKG NYDVTTVYGY DEKTGDVYYQ AAAINPHDRQ IYVSHSNGRV ERLTHREGNN 420
  421 SALFSGDYRF FVNVWSDYNT PYEFTNCTNQ GNGIKVLEKN DALKAKIAKY GWTKKKPFSF 480
  481 VTSEGVHLNG WMVKPADFDA KKKYPVILFQ YSGPGSQQVM NSWSTGSMGN GGAFDMYLAQ 540
  541 HGYIVVCVDG RGTGGRGSDF EKCTYLKIGE LESKDQVETA IYMGRLPYVD KNRIGIWGWS 600
  601 YGGFNTLMSM SEGRPVFKAG VSVAPPTNWK YYDTIYTERY MRTPKENPSG YETNPIQRSN 660
  661 KLHGALLICH GVPDDNVHPQ NTFEYAEALV QADKDFKEVY YTNRNHSIRG GNSRNHLLRQ 720
  721 ITNWFDTNLK 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle