YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|25989456
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCLLRQMERN LVLTRSTKRQ NKQWHLIPDR TGQQLRRNII VKRNLLAVVI PALLVAGAAN  60
   61 AAEIYNKDGN KLDLYGKVDG LHYFSSDSSK DGDQSYVRFG FKGETQINDQ LTGYGQWEAQ 120
  121 ANVNQPESNS SNFFTRLGFA GLKYGNYGSI DYGRNYGVLY DIEGWTDVLP EFGGDTSAQT 180
  181 DNYMAQRANN LATYRNDGFF GLVDGLDFAL QYQGKNDGHA YGKDADGSYS WDGAPLSNNA 240
  241 REIQGQNGDG FGMSTTYDLG WGISAGAAYT TSNRTTEQKW SGNQANSNVA GGNKAQSWGA 300
  301 GLKYDANNIY LATMYTETQN MTPFGSTGIA NKAKNFEAVA QYQFDFGLRP SIAYLQSKAS 360
  361 ELNSYNGFNG GKADLVKYVD LGATYYFNKN MSTYVDYKIN LLDENDFTRA NSINTDDIVA 420
  421 LGLVYQF

Type	Start	End	Confidence
Signal Peptide	1	61	0.93
N-region	1	52
H-region	53	58
C-region	59	61
Cleavage Site	61	62
Non-Cytoplasmic	62	427	0.99