YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CY24A_DICDI
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKFKLGNWA AMIGMAACWC LIAGGIMGIW YERRYIAIYS ICVGGVLYPL LYPLSFLGPL  60
   61 KAIFHQYYVA AALMAGLSVL CYFLVPTMLA AMVMDISAVV FLISAIKGER GDFFDKQD

Type	Start	End	Confidence
Cytoplasmic	1	7	0.62
Transmembrane Helix	8	30	0.91
Non-Cytoplasmic	31	34	0.61
Transmembrane Helix	35	56	0.90
Cytoplasmic	57	63	0.55
Transmembrane Helix	64	86	0.80
Non-Cytoplasmic	87	87	0.34
Transmembrane Helix	88	106	0.52
Cytoplasmic	107	118	0.59