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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|21483200
Protein type: Globular with Signal Peptide
Type Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKLGAILAQ SAVHLSEHRQ LLSQAFLSSI TYQRSRVKVR GNHCCAMKVV PSRAEHVNAL  60
   61 KAEEFDVLII GGGAVGCGCA VDAACRGLKT ALIEAEDFAS GSSSRTSKLI DGSGSYLGTA 120
  121 LREKDVEQLY IMLQMMSERV TMLKNAPHLN RIQPMIIPIY SFLQMPCTWL GLKVYDWISA 180
  181 ASNIRGSHII SREATMYEFP LLKTDGLRGG VVYYDGQVDD ARMCVALVMT AVALGANVGN 240
  241 HMEVVEIMPQ EGCCRVVSVK DKISCEQFYI QSKAVINATG SSTDAIRQMD KEGTAPILLP 300
  301 TLETQVSLPR YFGSGHYGLL SPALKNDDLT VYMVPFENHM VLGSREVDLD EVSSRGSPTP 360
  361 DPDDVDCLLE AAKKRMDPCV ELGRCHVLSA WTAIKASVSC PTDKENDDDK RGTPINSYMI 420
  421 EVSPDGLITL AGGRWSSYRV MAADAVDLAI KSCGLCDDHV TSSWTQDLKL DGAESWCCML 480
  481 PLEFVQDYGV PMDVAHHISD SYGYNGHALF SQAPDLKKRL HPSFPYIEAE IQYAMRNEYA 540
  541 CTLVDIIARR LRIAFVDAAA TLHMLPRILK IMAAENGWDE EEQKEQMVAA QEFLVRQMGL 600
  601 GSIVQPRSTS KSKPKKKGSS EGCCCRAAVR RGARSYSMEI SKKICVQPLV QHRSMSSTFL 660
  661 PLMTSLSYGL GR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle