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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|6682303
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMAQWLLGLW LAILLVHRPG AKAYRSGSGY HSEQSEPVGL SATGNAHSSY GGDQQQPIYH  60
   61 RDSACPPHFT GLVAYPHDCH RYVNCFDGSP TIQTCSPGTL FNDRTQVCDH PSNVVCPSAE 120
  121 SASTRLGRLR QLDSEPKCQP GVNGLQPHPS DCSKFLNCAN GQAFIMDCAP GTAFSPASLV 180
  181 CVHKDLAKCG SGTGAVRDDT SGTDNRQSKS YETSGRDQFG NRYTTRTTTT TRVIGDRWTD 240
  241 MNMQRPSGVG VEQNPHHHHH GYNPGWSGQE TSYVQRGPTQ STLYVEGSLQ PNRNYPTNKT 300
  301 PLAPMAPTNT GGVYYGQPVE DKENVPSRQN YSRRIDYGSP GNGWKPMPPL DPLGGQQPLN 360
  361 LDYSPHSPGA KEPQSQDSLP GQKPINLDYD EEPIPQYLHN GLPPYPGSPP RFYPDQLPSG 420
  421 SKPIGRQQPV ESSPDASGYP DQQKPLDPDN GLHGSKVPPR HSPNPGYPLY NESNLYGGLL 480
  481 PPKPDSPNTT PTPTPNPSSS QAPTPQLANR LHTFPIYPPV DNKTSLRNPI QPHYSPSYAG 540
  541 IAHSRDAPWA KVPVTSTTPA QDPDPFNPEL DEPFYDDVDF LTTTVRNVLV PPPFDHKFYS 600
  601 PQSTNPSINR NQSASGPNSQ AAIKEALKLM LRPYFNHSGN AQEQLAQQAE SAIVSVISKP 660
  661 STTTTTTPRP TSKTPKTDPD FDAELIKAGE QESLDSVDDD YVFPDARETS RTEQTLDPST 720
  721 TYASTNFQRS TRRAELDPDT LTATTMKTNW HAPGHSRDYH RRHPNLPDPF TEHHPNSSPH 780
  781 QHQHHHRHPH EHSADFHLRH PELPNPFPLK NETPQHQDLN DDWDLLPNSN AEEVTPKLAT 840
  841 RSSFNTQCDF DCGNGQCLKK EEICDGKKNC PNGKDEANCP PSDYEVRLSG GESPNMGRIE 900
  901 VKANGQWGYV CDDKFGLKDA DVVCRELGFQ MGAQEVRGSS FYAPPNQDFN YLMDEVECHG 960
  961 NETKLGQCAF KGWGVHNCGV DEVAGVTCKV PVMKCPNNYW LCHTSKECIP PAFVCDNTPD1020
 1021 CADKSDECAA VCQAPVQYRL EGGRNSNEGR LEVKHHGVWG SVCDDDFNLK SAQVACNSMG1080
 1081 FFGPAKIEKN IFGNSNGPIW LDQVMCFGNE TSIDQCNHWN WGEHNCNHTE DVALHCSAGP1140
 1141 PPRSQRYSQT QIKGGRSLGR ETTPKTYSQI GLWERSSKAV HTPRRCGIFK DDLTDEYAHR1200
 1201 EERVVRGNVA QRGRHPWQAT IRTRGRGGIS SHWCGAVVIS KRHLLTAAHC LYGSPKGAYF1260
 1261 VRVGDHYANI AESSEVDSFI ENWYLHENFR KGTHMNNDIA LVVLKTPLKF SDYVQPICLP1320
 1321 DKNAELVEDR KCTISGWGSI KSGVSTPAQV LGSAELPILA DHVCKQSNVY GSAMSEGMFC1380
 1381 AGSMDESVDA CEGDSGGPLV CSDDDGETLY GLISWGQHCG FKNRPGVYVR VNHYIDWIYE1440
 1441 KINESLLRF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle