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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|14030691, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQRPPPEDFS LKETRPHLGG GKLSGDKLTS TYDLVEQMQY LYVRVVKAKE LPGKDMTGSC  60
   61 DPYVEVKLGN YKGTTRHFEK KSNPEWNQVF AFSKDRIQAS FLEATVKDKD FVKDDLIGRV 120
  121 VFDLNEVPKR VPPDSPLAPQ WYRLEDRKGD KVKGELMLAV WFGTQADEAF PEAWHSDAAT 180
  181 VSGTDALANI RSKVYLSPKL WYLRVNVIEA QDLIPTDKQR YPEVYVKAIV GNQALRTRVS 240
  241 QSRTINPMWN EDLMFVAAEP FEEPLILSVE DRVAPNKDEV LGRCAIPLQY LDRRFDHKPV 300
  301 NSRWYNLEKH IMVDGEKKET KFASRIHMRI CLEGGYHVLD ESTHYSSDLR PTAKQLWKPN 360
  361 IGVLELGILN ATGLMPMKTK DGRGTTDAYC VAKYGQKWIR TRTIIDSFTP RWNEQYTWEV 420
  421 FDPCTVVTVG VFDNCHLHGG EKIGGAKDSR IGKVRIRLST LETDRVYTHS YPLLVLHPNG 480
  481 VKKMGEIHLA VRFTCSSLLN MMYMYSQPLL PKMHYIHPLT VSQLDNLRHQ ATQIVSMRLT 540
  541 QAEPPLRKEV VEYMLDVGSH MWSMRRSKAN FFRIMGVLSG LIAVGKWFEQ ICNWKNPITT 600
  601 VLIHLLFIIL VLYPELILPT IFLYLFLIGI WYYRWRPRHP PHMDTRLSHA DSAHPDELDE 660
  661 EFDTFPTSRP SDIVRMRYDR LRSIAGRIQT VVGDLATQGE RLQSLLSWRD PRATALFVLF 720
  721 CLIAAVILYV TPFQVVALCI GIYALRHPRF RYKLPSVPLN FFRRLPARTD CML

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle