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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|21464543
Protein type: Transmembrane
Type Confidence: 0.54
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRNDSPYTPL LNGSANNHRR DLLLVLSGLL LLASIIAFSG YRGGFINSRE PHADVSSSSS  60
   61 SSASSDEAAK PSAVSRGVSS GVSEKSNTFL SGKVVGEAES FPWDNTMLSW QRTAFHFQPE 120
  121 KNWMNDPNGP LYYKGWYHFF YQYNPNGAVW GDIVWGHAVS RDIIHWLHLP LAMVADQWYD 180
  181 SNGVWTGSAT ILPDGQVIML YTGSTNESVQ VQNLAYPADL NDPLLVDWIK YPSNPVLVPP 240
  241 KGILPKDFRD PTTAWLTTEG KWRITIGSKI NKTGVALVYD TVDFKTYERK DVLLNAVPGT 300
  301 GMWECVDFFP VSKKSENGSD TSINGVEVKH VMKVSLDDDR HDYYSLGTYD EKKVKFIADD 360
  361 FKNDVGVGLR YDYGIFYASK TFYDQKKNRR VLWGWIGESD SEYADVAKGW ASVQSIPRIV 420
  421 KLDKKTGSNL LQWPVAEVES LRLKSDEFKN LKVKPGAVVS LDIETATQLD IDAEFEIDKE 480
  481 ALEKTAQSNV EYECSTSGGA SRRGALGPFG LYVLADKGLS EYTPVYFYVV KGSNGKLNTP 540
  541 FCSDQSRSSL ANDVHKQIYG SVVPVLEGEK LSLRILVDHS IVESFAQGGR TCITSRVYPT 600
  601 RAIYGAARLF LFNHAIETNV TASLKVWANE FCIYTPIPPC SKGVRRN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle