YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21464462
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RVSVRCCRCV PPSPTDHAPQ PVRPPNCQPA NLPVRRPAIG MEQLCYLALS VLLAIIVVYG  60
   61 LLELHYFLRM CLCVLLARFV KRRCHILDTT TVNGLCLTND VDTLLYHMNN ARYFRELDFA 120
  121 RVDFYERTNL YRTITGMGGS VFQGAATIRY RRFIRPFHRF NIISRIIYWD EQSLFMEHRF 180
  181 VRPSDKFVHC IAICRQRVID VSMEAVMSEL LPRTSSNGFR ATVLTSLAAP SPAAGGISNP 240
  241 AMDTSLAENG HGTTSGGAAG TGATASATAA HCLKLKPSLP PELAKWIEYN DMSSKNLRSG 300
  301 C

Type	Start	End	Confidence
Cytoplasmic	1	43	0.87
Transmembrane Helix	44	62	0.93
Non-Cytoplasmic	63	301	0.57