YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21430644
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCCSCCGVTQ QKAWVFGLGT FFAVSGLLAI ICWPGFIDSG IMKALPLTPT SKTFEKWEEL  60
   61 PIPVYVYMYL WNWTNAADVQ ANGVKPIFAQ LGPYVYREER KKMDLEWHDN GTVTFNPRRT 120
  121 WFWEEELSGG KQTDLITAPH LPSLAASNQM RNSNVFLKFM FNEALNANGG HLFVTHTAAE 180
  181 WLFESFYDEF LHYAMTLNNP LVPKIESDHF AWFLNRNGSK DFEGPFTVHT GVGDIKEMGE 240
  241 IKYWKGQNHT GWYDGECGRL NGSTTDLFVP DEPKGEGFDH LHSGYLSDHK S

Type	Start	End	Confidence
Cytoplasmic	1	13	0.68
Transmembrane Helix	14	37	0.86
Non-Cytoplasmic	38	291	0.72