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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|21430570
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSSGVLVLP LLLLQLILNC RKAQSLPDII KIGGLFHPAD DHQELAFRQA VDRINADRSI  60
   61 LPRSKLVAQI ERISPFDSFH AGKRVCGLLN IGVAAIFGPQ SSHTASHVQS ICDNMEIPHL 120
  121 ENRWDYRLRR ESCLVNLYPH PNTLSKAYVD IVRHWGWKTF TIIYENNDGI VRLQELLKAH 180
  181 GMTPFPITVR QLSDSGDYRP LLKQIKNSAE AHIVLDCSTE RIHEVLKQAQ QIGMMSDYHS 240
  241 YLVTSLDLHT VNLDEFRYGG TNITGFRLIN EKIVSDVVRQ WSIDEKGLLR SANLTTVRSE 300
  301 TALMYDAVHL FAKALHDLDT SQQIDIHPIS CDGQSTWQHG FSLINYMKIV EMKGLTNVIK 360
  361 FDHQGFRADF MLDIVELTPA GIRKIGTWNS TLPDGINFTR TFSQKQQEIE ANLKNKTLVV 420
  421 TTILSNPYCM RKESAIPLSG NDQFEGYAVD LIHEISKSLG FNYKIQLVPD GSYGSLNKLT 480
  481 GEWNGMIREL LEQRADLAIA DLTITFEREQ AVDFTTPFMN LGVSILYRKP IKQPPNLFSF 540
  541 LSPLSLDVWI YMATAYLGVS VLLFILAKFT PYEWPAYTDA HGEKVESQFT LLNCMWFAIG 600
  601 SLMQQGCDFL PKALSTRMVA GIWWFFTLIM ISSYTANLAA FLTVERMDSP IESAEDLAKQ 660
  661 TRIKYGALKG GSTAAFFRDS KISTYQRMWS FMESARPSVF TVSNGEGVER VAKGKGSYAF 720
  721 LMESTSIEYV TERNCELTQV GGMLDTKSYG IATPPNSPYR TAINSVILKL QEEGKLHILK 780
  781 TKWWKEKRGG GKCRVETSKS SSAANELGLA NVGGVFVVLM GGMGVACVIA VCEFVWKSRK 840
  841 VAVEERLSAI LNE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle