YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21429130
Protein type:	Globular with Signal Peptide
Type Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLASRLNLLL PRVSWLRGCS TTAVGQKHQR QVPTEFAVHD PLQAHALKEQ CILVDANDQA  60
   61 IGAASKADCH RVHPETNDVK LHRAFSVFLF NSQGEMLVQK RSSHKVTFPN TYTNACCSHP 120
  121 LYEIEQERQE RNAQGIRVAA QRRLNYELGI PTEELQPQDF RYLTRIHYAD TGDGVWGEHE 180
  181 IDYILFLQKD VTLRPNSNEV SEVRYLRRDK IDEAVAKFSA PLTPWFSLIL QHRLKLWWDN 240
  241 LHQLEQFEDL SNIQRF

Type	Start	End	Confidence
Signal Peptide	1	25	0.66
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	256	0.99