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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|21428948
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFNNSHSHQD EYIREYAFEP ELLINREDYQ RKEERSQKST AASSASTPVR QRWDEVIAKQ  60
   61 KEQQRKQSIE IDPPGDDKNQ IEIEIEAFYY MYGRYTKDLG EFAKDEARKL KILEKRRKQE 120
  121 DKQRNKELLG KHSTRAKRVS SWIWRHTVAR LGEDWVFLAL LGIIMALLSF IMDKGISICT 180
  181 NARIWLYRDL TSQPFVQYIA WVSLPVCLIL FSAGFVHLIA PQSIGSGIPE MRTILRGVQL 240
  241 KEYLTFKTLV AKVIGLTAAL GSGMPLGRGG PFVHIASIVA QLLSKLVTSF QGIYENESRN 300
  301 SEMLAAACAV GVGACFAAPV GGVLFSIEVT TTYFAVRNYW RGFFAAVCGA TVFRLLAVWF 360
  361 QNADTVRALF LTNFTTEFPF DPQELFVFAL IGLVCGLGGA SYVWVHRRYV LFMRSNKRMN 420
  421 KFLQKNRFLY PGFLALLVSS ISFPLGTGQF LAGELSTHEQ VTQLFSNFTW SRDDLTVEQA 480
  481 AVVTHWMTSY TSVFGNLVIY TLFTFVVSII ASTIPVPSGM FIPVFKIGAG FGRLVGEFMA 540
  541 VTFPHGVRYG GRLSPIMPGG YAVVGAAAFS GSVTHTVSVA VIIFEMTGQI THVVPVMIAV 600
  601 LVANAVAALL QPSIYDSIIL IKKLPYLPDL LPSSSGMYSI FVEDFMVRDV KYIWHGISYQ 660
  661 KLKEVLKLNK TLRSLPLVDS PDNMILLGSV QRYELIKMIE KHIGREKRME VAQKWQKEAQ 720
  721 ERALEEEKKK QEVELKMRRP SRFEVLPAPD ILSLRQIAND EMLPPKKRAE TMHGSLAPRK 780
  781 SILKKTNSFN LKTYAQPMGH SPSITPYTTI TGNSEFRIRS AFEAIFKKST TLQDVQPDPE 840
  841 TGSLSPAASN HEVEVPRTPS TPGVSKKVQL PAQSNWDFVT DQIMLQVNPI STESNKMPAE 900
  901 KDFTDKALSN NGDSSKQSPS IKFKANKVAD VNRSPQTAKR CSKIRFANEV GVNGSPTRTK 960
  961 CKIKPENVLG YSIEDVDETT NPESLAESIQ KPKSVRLPRE RVIDMSPEDQ KQWELEEMLK1020
 1021 PIDLQKANVH IDPSPFQLVE RTSILKVHSL FSMVGINHAY VTKIGRLVGV VGLKELRKAI1080
 1081 EDINSNSFVP PTRDEDADEK PAVEKPLLST NSSDKAVDMT VTSMDSALSN SENCSDIEME1140
 1141 HIKHTDKGTV SLTMPPQESK QSPSADKSNT ENGNHA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle