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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|1143599
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKLVLVLLL FPVFILAQNI LHNGSFDAPI LIAGVDIEPP AADGSINTQN NWVFFTNSNG  60
   61 EGEARVENGV LVVEITNGGD HTWSVQIIQS PIRVEKLHKY RVFFKAKASV QRNIGVKIGG 120
  121 TAGRGWAAYN PGTDESGGMV FELGTDWKTY EFEFVMRQET DENARFEFQL GKSTGTVWID 180
  181 TVWIDDVVME DVGTLEVSGE ENEIYTEEDE DKVEDWQLVW SQEFDDGVID PNVWNFEIGN 240
  241 GHAKGIPGWG NAELEYYTDK NAFVENGCLV IEARKEQVSD EYGTYDYTSA RITTEGKFEI 300
  301 KYGKIEIRAK LPKGKGIWPA LWMLGNNIGE VGWPTCGEID IMEMLGHDTR TVLRTAHGPG 360
  361 YSGGASIGVA YHLPEEVPDF SEDFHVFSIE WDENEVEWYV DGQLYHVLSK DELAELGLEW 420
  421 VFDHPFFLIL NVAMGGYWPG YPDETTQFPQ RMYIDYIRVY KDMNPETITG EVDDCEYEQS 480
  481 QQQTGPEVTY EQINNGTFDE PIVNDQANNP DEWFIWQAGD YGISGARVSD YGVTDGYAYI 540
  541 TIEDSGTDTW HIQFNQWIGL YKGKTYTISF RAKADTPRPI NVKILQNHDP WINYFAQTVN 600
  601 LTTEWQTFTF TYTHPDDADE VVQISFELGK EAPTTIYFDD VSVSPQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle