YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21428414
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVHRLLAASI GADSTYAQLL DRKSNEELCH NLNYRHKMAQ YAGRASVALN THLFFRGKEE  60
   61 DEEGYVLFVR KNALQVLIPK YGLEGTLYLK SDKDGKDGVE RVKSEIVFTF NEEDHTQRCG 120
  121 DVVFHSFDPV TVRLSLDSSN VQHEKLIFRL VKPYIKGFSV ETTTEGTDSQ AVSAAPPSKK 180
  181 TKKDKKKK

Type	Start	End	Confidence
Signal Peptide	1	17	0.97
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	188	0.99