YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|45720166
Protein type:	Transmembrane
Type Confidence:	0.88
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHISLESTDT KLDTSNEPSA QLIEENVALP KDIFRSYLSY WIYEGAHSKP IMIMFLASVI  60
   61 LIPLTNFRVY HLIPLLPSIL CSSPQQINNK GFNTNLSSEV STCKPSVKEE WRIITYKMNE 120
  121 YLFDHKIWST PYYFYCEEDC HRYFLNFIEG RTFEKPTSNA EENVQETEAG ESFTLNPGPD 180
  181 FQNCFPRQRI L

Type	Start	End	Confidence
Cytoplasmic	1	50	0.60
Transmembrane Helix	51	72	0.77
Non-Cytoplasmic	73	191	0.73