YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|34763092, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.91
Topology Confidence:	0.49
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLALSLVGCT GFEAGNGGYT AGGAAGGAAV GALAGQIIGK DTKGTLIGAA VGSLLGMGWG  60
   61 AYRDNQEREL KAKLQGTQAQ VRKDGNALVI NLPGGVTFAS DSANISSGFY SALNGIAQSL 120
  121 NNYPETRIQV NGYTDNTGKD AHNQELSQRR ANAVAQYLIA QGVASNRIVA NGFGSSNPVA 180
  181 SNSTQEGRLQ NRRVEIKILP AQ

Type	Start	End	Confidence
Cytoplasmic	1	15	0.49
Transmembrane Helix	16	38	0.77
Non-Cytoplasmic	39	43	0.55
Transmembrane Helix	44	63	0.78
Cytoplasmic	64	202	0.54