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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|12054727
Protein type: Globular with Signal Peptide
Type Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MREKNWLQGV LIITLLTMIV ACISMDFKTN VRAASISQPM PINKLFPDPG LSETIAETLS  60
   61 KKNITDVVSQ QELSSIDELY ADESWIKSIK GVQYLSNLRK IFFQKNQIKD ISDLASLIKL 120
  121 EEVRLNGNQI SDISALANLS KLNVLDLSNN QIKDIDALSN LVKLKSLNLD DNQLTDISRL 180
  181 ESLTALKELF FTGNQITDIR VLSKLTNLTE LVFNKNQVTN IAALSKLTNL TALGFRENNV 240
  241 KDIAPLVKLV KLTTLAFSQN QVKDISVLET LDILVYLAFD GNQVKDISVL AKLNHLAYLV 300
  301 FDDNQVTNID ALAKLPNLIG VMFNDNRVRN MSPLANLTKL EKLHAEGNYI QDVKALSSLT 360
  361 KLKELKLDRN CIVDISPLAG LNNLDELELS NQIFTNSTIG YQENLTISNI IKDRAGELIV 420
  421 PDTISDNGTY KKPNISWNIP TLKKEVSYDF ELYVIIGQAG SYFSGKVIQP LNKLDTIEYN 480
  481 KAINAYGRVK SGVKSAIWSH PYRTKDAKQI GTLSVYAGKN LRILQEAKTT SGTYYQIRVG 540
  541 KKTIGWVEAK NIAFFYKPSM EKKANGVRYI APGKESQHVY KLPVIDAAID EGTLAKFKGK 600
  601 KLTLQREVTI EKEKWMLLQG IGWVKATNLS TEHYDKVLYN KAITAYARVQ IAKGKQVWST 660
  661 PYRIAGYKVI GSLSRYNGKN LRILREAKTR SGIYYQVRVG KKTIGWVEAK NITVFYKPSM 720
  721 EKKANGVRYI APGKESQHVY KLPVVDAAID GGTLAKFKGK KLTLQREAII GKEKWVLLQG 780
  781 VGWVKATNVS ALRYDKVFYN KTVTAYARVK TVMVWSNPYR NAGNKAIGSL SRYTGKNLRI 840
  841 LREAKTRSGV YYQVRAGKKM IGWIEAKNLT VFYKPSMEKK VKGTRYIVPG KEGQHVYKLP 900
  901 VADAAIDGGT LARFKGKKLT LQREVTIGKE KWVRLQGVGW VKATNVSALR YDKVFYNKAV 960
  961 IAYAKVKTPM VWSTPYRTAG YKAVGPLLHY TSKNLRILRE AKTRSGVYYQ VRVGKKTIGW1020
 1021 LEAKNLAVFY KPSMEKKAAG TCYVVARKKN NLYYSLPVAD GTISRGKLQK ISRKNLTR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle