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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: AB25G_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAFDGVENQ MNGPDSSPRL SQDPREPRSL LSSSCFPITL KFVDVCYRVK IHGMSNDSCN  60
   61 IKKLLGLKQK PSDETRSTEE RTILSGVTGM ISPGEFMAVL GPSGSGKSTL LNAVAGRLHG 120
  121 SNLTGKILIN DGKITKQTLK RTGFVAQDDL LYPHLTVRET LVFVALLRLP RSLTRDVKLR 180
  181 AAESVISELG LTKCENTVVG NTFIRGISGG ERKRVSIAHE LLINPSLLVL DEPTSGLDAT 240
  241 AALRLVQTLA GLAHGKGKTV VTSIHQPSSR VFQMFDTVLL LSEGKCLFVG KGRDAMAYFE 300
  301 SVGFSPAFPM NPADFLLDLA NGVCQTDGVT EREKPNVRQT LVTAYDTLLA PQVKTCIEVS 360
  361 HFPQDNARFV KTRVNGGGIT TCIATWFSQL CILLHRLLKE RRHESFDLLR IFQVVAASIL 420
  421 CGLMWWHSDY RDVHDRLGLL FFISIFWGVL PSFNAVFTFP QERAIFTRER ASGMYTLSSY 480
  481 FMAHVLGSLS MELVLPASFL TFTYWMVYLR PGIVPFLLTL SVLLLYVLAS QGLGLALGAA 540
  541 IMDAKKASTI VTVTMLAFVL TGGYYVNKVP SGMVWMKYVS TTFYCYRLLV AIQYGSGEEI 600
  601 LRMLGCDSKG KQGASAATSA GCRFVEEEVI GDVGMWTSVG VLFLMFFGYR VLAYLALRRI 660
  661 KH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle