YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SPC3B_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHSFGYRANA LLTFAVTILA FICAIASFSD NFSNQNPSAQ IQILNINWFQ KQPHGNDEVS  60
   61 LTLNITADLQ SLFTWNTKQV FAFVAAEYET SKNALNQVSL WDAIIPEKEH AKFWIQISNK 120
  121 YRFIDQGHNL RGKDFNLTLH WHVMPKTGKM FADKIVMSGY RLPNAYR

Type	Start	End	Confidence
Signal Peptide	1	26	0.63
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	167	0.97