YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|1072396
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLIAYTVMTR PLPETIASYF LERAYREGGG TNVVNVILVD FRGFDTLGEI AVLCIVALTV  60
   61 FALLLRFRPQ SDSLEAPEQQ KVQNAFDDDH PDRAAGDSVA EYLFIPAVIM RWMFPVTGML 120
  121 AAFLFLRGHD LPGGGFAAGI AMSIGFILQY MSGGTRWVEE RLRIHPLRWM SIGLLVATAT 180
  181 GVGSWFFGYP FLTSHAQYAS LPVVGKFPLA SAILFDLGVF SLVLGATVLI LIALAHQSVR 240
  241 APRAHAKAAR SDKEAVR

Type	Start	End	Confidence
Non-Cytoplasmic	1	45	0.86
Transmembrane Helix	46	65	0.87
Cytoplasmic	66	107	0.91
Transmembrane Helix	108	126	0.93
Non-Cytoplasmic	127	133	0.76
Transmembrane Helix	134	153	0.93
Cytoplasmic	154	168	0.83
Transmembrane Helix	169	189	0.93
Non-Cytoplasmic	190	211	0.88
Transmembrane Helix	212	235	0.90
Cytoplasmic	236	257	0.94