YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FNRL2_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATTMNAAVS LTSSNSSSFP ATSCAIAPER IRFTKGAFYY KSNNVVTGKR VFSIKAQITT  60
   61 ETDTPTPAKK VEKVSKKNEE GVIVNRYRPK EPYTGKCLLN TKITADDAPG ETWHMVFSHQ 120
  121 GEIPYREGQS VGVIADGIDK NGKPHKVRLY SIASSALGDL GNSETVSLCV KRLVYTNDQG 180
  181 ETVKGVCSNF LCDLAPGSDV KLTGPVGKEM LMPKDPNATV IMLATGTGIA PFRSFLWKMF 240
  241 FEKHDDYKFN GLAWLFLGVP TTSSLLYQEE FDKMKAKAPE NFRVDYAISR EQANDKGEKM 300
  301 YIQTRMAQYA AELWELLKKD NTFVYMCGLK GMEKGIDDIM VSLAANDGID WFDYKKQLKK 360
  361 AEQWNVEVY

Type	Start	End	Confidence
Signal Peptide	1	24	0.85
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	369	0.95