YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|20803880
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFPTLAATT LAASFLFSGQ ARSQFVVIDP AVVTQAGLTA VSTAQILIKS AQTLASTMEM  60
   61 VEILKSSFGV TGLLSSLNQG NHYPSGYQLE RQMFEGQAPT SIKARAIADN PNRKVDGTDS 120
  121 EAKLLQGQIA GAINAAALAS DTLGVMDKRL KANDNTLGQL SRSGNIVQAT VTNGLVLKQI 180
  181 HDAIIQNVQA TSLLTMATAQ ASLHAAEEAA MQRRERQDTA RMFE

Type	Start	End	Confidence
Signal Peptide	1	23	0.98
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	224	0.99