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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|3445385
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARLKTAQPN SSLRKIAVVV ATAVSGMSVY AQAAVQPKEE TITVTAAPAA QESAWGPAAT  60
   61 IAARQSATAT KTDTPIQKVP QSISVVTAEE MALHQPKSVK EALSYTPGVA VGTRGASNTY 120
  121 DYLIIRGFAA DGQSQNNYLN GLKMQGNFYN DAVIDPYMLE RAEVMRGPVS VLYGKSSPGG 180
  181 LLNMVSKRPT TEPLKEIQFK MGTDSLFQTG FDFSDALDEE GVYSYRLTGL ARSANAQQDR 240
  241 AEEQRYAIAP AFTWRPDDKT NFTFLSYFQN EPETGYYGWL PKEGTVEPLP NGKRLPTDFN 300
  301 EGAKNNTYSR NEKMVGYSFD HEFNDIFTVR QNLRYAENKV SQNSVYGYGV CSDPANGYSK 360
  361 QCAALAPADK GHYLARKYVV DDEKLQNFSV DTQLQSKFAT GEVDHTLLTG VDFMRMRNDI 420
  421 NAWFGYDDSV PLLDLYNPVY TDFDFASRDP ATSGPYQILN KQKQTGLYVQ DQAQWDKVLV 480
  481 TLGGRYDWAD QESLNRTTGI TSKRDDKQFT WRGGVNYLFD NGITPYFSYS ESFEPASQTG 540
  541 ENGKIFAPPK GKQYEAGVKY VPNDRPIVIT GAVYQLTKTN NLMADSAGSF FSVEGGEIRA 600
  601 RGVELEAKAA LSASINVVGS YTYTDAEYTT DTTYKGNTPA QVPKHMASLW GDYTFFDGPL 660
  661 SGLTLGTGGR FTGSSYGDPA NSFKVGSYTV VDALVRYDLA RVGMAGSNVA LHVNNLFDRE 720
  721 YVASCFQTYG CFWGAERQVV ATATFRF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle