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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|2660584
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPGFNYGGHG DGTGWSSERG DGPAPGGGMQ GNGGGHSGNN DSGSNSVSQQ ISAIQNDQKL  60
   61 KQKVVNMLIA ARKMNPDAKM ILGSIAPSGV MQVTIEGVTS TQARQLGLGG LVMGYNASGV 120
  121 IGAVGEIDTG HRLNASGAST PGSETSVDSF VNGQKPAEEW HAVAKDSWTG AGPVNTGLVN 180
  181 NAIKSVRIIK KGYVTGVLTP EEVMNKAEYK AMRQAFDSLP LAKQGEAVRQ IVAAWSLAYQ 240
  241 DFPVNLKKEM GRVTERIVDA INLALILNQT ESRLSESQKN VDVANQIISD TVKAINDVNK 300
  301 KIAEKRNQQV SLTDLMNKKQ KEVEDLKKIF KNHSYHRIRD AQREYDDARN KYALLASDIN 360
  361 ALQAQVSGLT ARKQQAEQNK AAAEKAKADA AAKAAAEKAA AEAKAKAEAE KARKEAEEKA 420
  421 NDEKAVLTKA SEIIISVGDK AGEYLGDKYK VLSREIADNI KNFQGKTIRS YDEAMASVNK 480
  481 LMANPDLKIN AADRDAIVNA WKAFDAEDMG NKFAALGKTF KAADYVMKAN NVREKSIEGY 540
  541 QTGNWGPLML EIESWVLSGI ASAVALSFFS AIFGTFAMLG VFSTSLAGIL AVILAGLVGA 600
  601 LIDDNFVDKL NNEIIRPAY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle