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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|28829253, gi|...
Protein type: Transmembrane
Type Confidence: 0.88
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSLRNSYSI LLKIVIISTC LLLLINIALI YEDPNLIDSN CKTTTTITKT QNNKNNKGLE  60
   61 NLNKSKKKLL LILDYKLFNE DTYMKSFSEC TSITNQPQCG FTTDISLANE SDGILYFIPR 120
  121 TTKKNYNRSY TSVHRTSEKQ LFFGWSMESP SMYPLENDDT HLSLNYNVTI GYPLNDYQKY 180
  181 GAGVSDEEYE EKDIQSSHIY TPYGPVPFKG SDHYSYLFKF GKLKEIPKKR DSNIMWMAGN 240
  241 CRNQKLGRTK LVKQMMRFTT IDSYGKCLHN KDLKVNYGPN VLLRSLQKLK ILRKYDFVVA 300
  301 IENSRCEDYV TEKLWEPLSV GTIPIYLGAT NIDEFLPHPD AIINIANFNS INHLMKYVRD 360
  361 VGLNETLREK HLAWIKKPLP KKFKNLLNQS LNNQNLFCSI CKKLVNLDNN DNINYTPLSK 420
  421 PFKQCIEGKF TLPIYTEEEK ERGRLLRLQK QQEQEKLELQ NNNDNYTNDN EEEEEEEDND 480
  481 SGNDSGNDSG NDSGNNDSNS I

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle