YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: UGGG_DICDI
Protein type: Globular with Signal Peptide
Type Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARIFKFFVF LLIVFISNVL LLVESNEGDN SFSSKSIQLS LVSNWGETPS YLEAAEFLHN  60
   61 QDKSLFWKFI EEFNKIDFST NYSDKIYYES TISLMKSVLS SNTQFLSEFL SIDLAMRTYS 120
  121 PRVETYRQLA ISNMKLNNIE HSITTADNKT ITLFNSGGWV QIKNKIITDV NEINESLFKD 180
  181 VAVVDDEENE FIRLYDFDHI FPTLANTVSS SSSSPSSIPI VILYVDIKSE FFKLVHPKLK 240
  241 QFSQMGKIKY CLRYVVQESN QKLNLQGYGY ELSIKNLEYK VMDDSAIKKD IIIDGVKSKT 300
  301 IINIPNEDVQ GFNFHKLQKR KPELTSKLST FRSYLMAKSQ EAKELKVWEL KDLGIQSAQK 360
  361 IIQSGDPLRS LEYISQKFPT LSNSLSKITL NESLKSVIES NQKIIPSTTD QTLLLNGRLI 420
  421 DTNELSPIEL SRIILEEYEH STTIQQQGPL SSKTVQDIIS AQLPIRIQLL PTKEELELNG 480
  481 GNEPFVSLNN LELDYIYRQW EPKLQSSVLD KPVTSPQDIF IRKNLLTTVI VLDWNNINTF 540
  541 EIIPEIQEMV QGNSLIPTRI QLLFNTKSNN NNNNNNNNND QNSQTSNFIQ GKDLAKVFLT 600
  601 IKNSNLGNRG AFFFITALNY FKKMYIPNEL GITRSVLSSS FQAVLQQMGG SVRSLQHALT 660
  661 NTDFDNLLES SNQLIERLEL LDTTTSQSTT TTTTTKILPK VFVNGVQVKY SNIDQLSFDL 720
  721 LVSLYDEFDN LKPLFKESIL STTTAQYYET ILTSSYWKDN NLPFLKKLNS MISNEKYSHL 780
  781 ITNSKNRNQE VDAQNVLKNL LYFRNNENKD EQNLLNLIVI GDFDHYNTRD ISLELLRQLE 840
  841 KGELKNCKLT FISNPIDINS VVNTAGNENQ ILGKLITILK HYGKILTPQL VIGLFEKVQS 900
  901 DPTIIDSFKT MKQIIELSGF DIAANDIWVA QSVNLFKQSS KVCKQYLGIQ STNKSPLSIL 960
  961 VNGRIITPPL SYDDAASFIQ SDFKLLLEIE MIKAKKTFEL LNSDPILKDK SNLKISDLLN1020
 1021 KVQSLVGYYY NGNNQLDSNI KRKRIPNSLS ISFSHKPPTL SSSSSSSSSN SNDVPLKFLM1080
 1081 IINPFNKVSQ KLVPMVREFS NKLNIPVDVI LNPPVSLSEL PLKTYYTYVI KLSSEFNNEN1140
 1141 VLYNQPLGIA TDIPEDRVVT LALDIPSSWL VQPIIAKYDL DNIRLKDLGD EQVLTAVYEL1200
 1201 ENIVIEGSAN DMTTDNAPAG LELLLNPIST QTNKTQDTIV MNNFGYYQLK SNPGIWKLTI1260
 1261 APGRSSDIMD MVDHPNQKEK ETFVIVPHRL VVIDSLYQSL SSLSVVRKAG QELRPILQPI1320
 1321 DEYEKQKEQE KEQKLKQNSS GFFSNLFSSK NDATDSVATH QKKSNLDTIH IFSVASGHLY1380
 1381 ERFLKIMMLS VVKNTESPIK FWFLKNYLSP AFKEFIPEMA KEYGFQYELV TYKWPWWLRK1440
 1441 QTEKQRIIWS YKILFLDVLF PLDVPKIIFV DADQVVRTDL KELWDMDLHG ASLGYTPFCD1500
 1501 SNKDTEGFRF WKSGYWRQHL AGRSYHISAL YVVDLVRFRR LAAGDQLRAT YDQLSRDPNS1560
 1561 LANLDQDLPN YLQHYVRIHS LPQEWLWCET WCDQESKSKA KTIDLCNNPL TKTPKLENAV1620
 1621 RIIDEWTTLD NEAKEFELKI DQSKHHRQIE LDHQNQLPNS KPIENIDDIL LNLAESQKDL1680
 1681 F

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle