YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	C560_DICDI
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFGRTLNTFT SRNAPLVRNF DKFIVNNTLT SKNIYLSQTN TTNTPLSYST QAKKPFTITE  60
   61 KRIDELKTPY QPTSPHLTIY KFPLPAVMSI MHRATGICLA LGITGLAGVT LFAPHDAIHY 120
  121 IQLLHTQYPA LVYPAKFAVA LPLTYHFCTG VRHIIWDETV KGLSISQIES SGKVLLAVVA 180
  181 VLSTIFTFVS FK

Type	Start	End	Confidence
Cytoplasmic	1	93	0.97
Transmembrane Helix	94	114	0.91
Non-Cytoplasmic	115	131	0.87
Transmembrane Helix	132	156	0.71
Cytoplasmic	157	170	0.83
Transmembrane Helix	171	191	0.88
Non-Cytoplasmic	192	192	0.85