YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GACFF_DICDI
Protein type: Globular with Signal Peptide
Type Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNGSPYSSSS WVKSSLSTNS LGSLSNSYAA GSAGGSGNRS TVRGDSNKDQ KLLGYLQKQS  60
   61 KSQLPNSNVK IFKKKWFWFE SDSGTLFYSA TSTGALSTPL TPSSLSENIK SIKITSQTTI 120
  121 EQSISFRLEL IIKDKVPNDE FTVLNWVNTL NQWKKLNCNL DFTNDTTTTT NNSNNSNSNN 180
  181 NNKQYNSIEN PDYLGKFGEV EGLLNAMSVS TSLNTMKTVK PLINKIQNDS EQLKLVLSQV 240
  241 EQQIEFLKSC QLELISHLSN DNNNNNNNNN NNNNILQILQ QQQPISSKRT VSNDNLVGSN 300
  301 NSNNQLSLSI GLPINLNTSN TTTTTITNNT IEGENDDDEE EDEINQTSDI FSLLPTHLTL 360
  361 YVFSYLEPKE LLILAQVSSQ WQKLAGDNLL WVRFVTHFIT PASIFDKSHN WKSVYLANTV 420
  421 TSLGYCSNYY YLKNQQKGGI CTNKEKYMNR AISMYGVTPL TSLSSSKEGW LYKRGDDLLR 480
  481 IWKKRYFVLR DSSLFYFKHQ NDNFPCGVIL LNHGTKLKRA SASTRKNCFK ILQSKNSTIT 540
  541 MVHKKRMPYY LSTDKEDDCN DWMILLNSII KSNTQHQNNY GVITISGTSN NNNNNVYINN 600
  601 NNNNNNNNNN NNNNNNNNNN NNGSQSYNLP PLLSKSPSFS NALTSSTGIS GGGGGSTKSR 660
  661 KSHKKSFSSG GGGSGGNNNF EQMQQQIQSV HLTPIYPMFG VALSKILENQ SLITTQTHLK 720
  721 IPFILYICLN YIISKGIKEE GIFRVSGSLR EVQELQEHFE QGREIDLDQH DIHAICGLVK 780
  781 TFFRKLPHTL VAADLDEYST SVQLAASQTE DEKIQEFKFI FESISENSFH IFELLLYCLR 840
  841 LIVRNESFNK MTIENLLIVI MPTLKCSPVL ITNGIKYYDE IFIKK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle