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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|28830062, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNIIKLLLVL ICFIGIISAQ TFNFAFDPTL CGAQENPCRF TDPTNWQQGA VPSNNSNVVI  60
   61 DFTKVTNANK QVFIVASGIN NIFTSINIVG TSAVNVVVSF QNTNMQVTGG FTGNNSATIV 120
  121 FDNEKSNNIT QFGYDVEVNG KFLLFGSTMQ ASYSILQFKD IFTDQNSQFS AQSFSNVLIN 180
  181 GVAQFWTTVT FTDNSILTAN ECFFNAGINS DDRVIVGPTT FYGQSNLEIV TLNDDIIVQG 240
  241 GALTIADSFK YTGNPSIKVT NANLTISGSA SANFPSINLQ NANLICFHPK GNFANGVQGN 300
  301 GQITFDINKQ GNVESECYLW NVNSVGISVT VAGGLNLFVQ NCTFGHLTDK QSSFVINPDH 360
  361 QPTPSVQFDG GNSLGYISTN LTQIVFSDAS MNTLNGPFDS WVRKYPINLL GNLAFNQVNF 420
  421 FGSIDTLDKD SYIGIDSGII GGSVDLIAGR IHPQSIATIN GDLIMTSGAV LDMDQTSEQF 480
  481 AVAGNLEMDA ESTIFIAETL STDAGALITV DGNLVLNGTL IMDITDTNPS DGDSYKIISC 540
  541 AGSTLGTFST IVPLTNGQAT TLDYSVSVSD DGIVSIKFNS KEQSHKKLPG WAVFLIIVAV 600
  601 LGTVAGGAYG YIRYKKRAGY LPINN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle