YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|60470965, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.83
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGYDEDVMFI RVIKSNGTIS NFKVPEVCVD IKEKYEISEN DEYQCEVLMP SNLLSDICNE  60
   61 LKSYKDLNLK IQVNKNNLLF KIDDSIINAD IVLENKKTKE FYLICKKNFS IEFKNKYFLK 120
  121 INNIVKKINI KECFLQMNEK YPLIIIFSIC SVSSFQFYLA PILE

Type	Start	End	Confidence
Cytoplasmic	1	140	0.76
Transmembrane Helix	141	160	0.78
Non-Cytoplasmic	161	164	0.74