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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GACF_DICDI
Protein type: Globular with Signal Peptide
Type Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTHKKKKSL GGLFSHSSSS PNLKSFLTEE VIHEQQQQQQ QHNNNNNNNN NHQRQPSTTS  60
   61 TSSYIDSASS SIEETSGYLS KTSSSSSLPS SPLHNQNQNQ NGNIQLNSSS GSLNNNEQQQ 120
  121 QQQSISQTSS PNTSSPIMGK KKPSRLAQAF KRVKNNGNNK LKKEIEELTN KTGLNQQYTH 180
  181 SNLPFNVVES DIDNGSSGGT TSSTGNIISH SKSPSSSSSS SSSKKHQRKS RFIEPISQST 240
  241 EDYTDIPRII KMSVEYLFEK CLLVPGIFRE SANAMELQRL SQLFEKGGDI DLSEYTDPHC 300
  301 IGGLLKLYFR EKPIPIFPYD LHKRIYSVLN EEDSNIKVKS LLESGLGKGQ FLILRYLFEL 360
  361 LNAVSINCNV NFMNYQNLAI CFAPSLIQSF DLSCYDVIER LIENYHSIFG VVVPVVDNSS 420
  421 NVSSSSLAHP IIGGKSETNV SLNNLTVTIL DHGDINNNSN SSNNNNSSSS SSPYKKSPKP 480
  481 SPKSSPKLNN RNSISPKLSS STSFRKSINL SSNSIMISDE VQQEQQNQQQ QQDEQQDEQQ 540
  541 DEQQDEQQDE QNSNSTSINT SSSSITRPRK GSTVQYLNRI NTCRRPSSWT NNNRIKQQQH 600
  601 HHHHHQQQQQ HQQHQQQQSS SSESNSSLTS SPQKRLNSVN GLESYEEGKN VNEIYSSLKE 660
  661 ESSKLPKKSS LNRQMTIVNS NNIGNGDEKN SDCTTSDEDE ELKISKPIIR STSVNEILKE 720
  721 TNDDNNNNDQ INNSNSSNNI PKTTITTTTN NTTTTNNISP IVKSKSQIIT SSAKVTPTPT 780
  781 PAPMQTSSFL STKQTNSPSS SSSPSSTVSS TSSSPSSSLS SSIDNKTMSN VNYNRFQPAN 840
  841 RTVSSPNVRN FSVPTTTTTT SIGSNSFVSP RFIGKRTTPS IFSPRKQSIC KPKNTTSSLS 900
  901 SSSSNISKST NSTPTPTPAP ILTSTLSVNS TSSSSKLQEK ALPTKTTFIT QTSSPLLLPQ 960
  961 PLTSTSTSTS TSTSTSTSTS TSTSTTIPTP TPTTSSFKSN SFSTSNDNSN NNNNNNNNNN1020
 1021 NNNNNNNNNN NNNNNVTSPT IVSSPSSPTS PISPTSSTFI KGHSHSNSLS QTPSSSSSSL1080
 1081 GNRLTAPGRQ LNHTNSTSSL ISKFNQIDTP SGINQGWKGG VVVQKKQDPV KKSLAIFEKE1140
 1141 

YRC Informatics Platform - Version 3.0
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