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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|60472134, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPKKKPVTA SNAVTQSSSA TTAIPTTINI PVAATAVVAQ KKIQWCWAGD SGVGASQDIL  60
   61 VEYDSKLNSE IESQYQMHLL KPKVLKYLRF KLDKERYIDF KKMVQTRYDD LNKMRTVERQ 120
  121 EIIPGSTLPP PTTNATSKRR RKIISSDDSD TDSENSDSSS DSSDSDVSDD SDDDEDDEDY 180
  181 IARWFWAGDS GGGPSKGGGH QDVWVEYDDM NMRKKLEKAF SIGKKKLKVD KERFVDFQNM 240
  241 LQRRYDDESK RRNLKREDPL KVRPAKKLTK SQQISNAATA ANAMAASHAT TTTATPTTTT 300
  301 TTSTAPVTRS SSKGQMIASN GATISTTQKP TLTSTMSTIS ISSIIKCPNT WTDVDSMNYK 360
  361 EVDVKPHENE FQWMSKLFSQ TISSNHKGMG TLSPIVFNDL KVTRVVRVQN PMLWVSYHAR 420
  421 KQKILDDNNG SCPPIHSVIT NIPGSPELDK KANELFLFHG LNVSSVAGIA KFGFDPRFCS 480
  481 LDGMFGAGLY FAENSSKSNQ YCHGGACTCS GFQATSCKCK PSDEVCLLVC RVVMGDCLVE 540
  541 NVFRGNGPGQ FWNGRRTEPK KPNNINIYNS VIGESKPNYG PKAALQLREY IVYESSQVFV 600
  601 EYKVYFKRVK 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle