YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|21310151
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSILERYKW HQFSVVTSQI AGHDDFVQAV RERVAEMQEH FKFTILNSIV VTRTSDLMEL  60
   61 VNSEARVMLL YATQTEAITI LRAAEEMKLT GENYVWVVSQ SVIEKKDAHS QFPVGMLGVH 120
  121 FDTSSAALMN EISNAIKIYS YGVEAYLTDP ANRDRRLTTQ SLSCEDEGRG RWDNGEIFFK 180
  181 YLRNVSIEGD LNKPNIEFTA DGDLRSAELK IMNLRPSANN KNLVWEEIGV WKSWETQKLD 240
  241 IRDIAWPGNS HAPPQGVPEK FHLKITFLEE APYINLSPAD PVSGKCLMDR GVLCRVAADH 300
  301 EMAADIDVGQ AHRNESFYQC CSGFCIDLLE KFAEELGFTY ELVRVEDGKW GTLENGKWNG 360
  361 LIADLVNRKT DMVLTSLMIN TEREAVVDFS EPFMETGIAI VVAKRTGIIS PTAFLEPFDT 420
  421 ASWMLVGIVA IQAATFMIFL FEWLSPSGYD MKLYLQNTNV TPYRFSLFRT YWLVWAVLFQ 480
  481 AAVHVDSPRG FTSRFMTNVW ALFAVVFLAI YTANLAAFMI TREEFHEFSG LNDSRLVHPF 540
  541 SHKPSFKFGT IPYSHTDSTI HKYFNVMHNY MRQYNKTSVA DGVAAVLNGN LDSFIYDGTV 600
  601 LDYLVAQDED CRLMTVGSWY AMTGYGLAFS RNSKYVQMFN KRLLEFRANG DLERLRRYWM 660
  661 TGTCRPGKQE HKSSDPLALE QFLSAFLLLM AGILLAALLL LLEHVYFKYI RKRLAKKDGG 720
  721 HCCALISLSM GKSLTFRGAV FEATEILKKH RCNDPICDTH LWKVKHELDM SRLRVRQLEK 780
  781 VMDKHGIKAP QLRLASSSDL LNHHHLKERP PLLGNLSLAA SAQDLYRWSY KTEIAEMETV 840
  841 L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle