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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|19913101
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNKKLNYKV PSIVALTLAG TALTTHYAHA ADNTQDQKSN KNVLNDENTI KQSEEIKSEV  60
   61 SNPTTNISGT QTYNDPSQVQ ELKSDEPENY DAQLDELNKD TSSQNIYPTQ NQEDQNNSDI 120
  121 NNYTEAHTEQ LATEAQNESA QDESNDVSSV TDDNVNVAQN DNDSDVSNTE APSSNAENEN 180
  181 LVASNSSEDT DDNTNVTQND DDSAASITEV SSNESTSDKE NKNHDTSNSS EDKDVNTDVT 240
  241 QNDDDSAASI TEVSSDDSTS DAVNENHDAS NKTEVKDDNT NVTQNDDDSE TSNTEASSNE 300
  301 STSVKENENH DASNSSEDND VNANVTQNDD DSEASNTEIS SNESTSDKEN KNHDTSNSSE 360
  361 DKDDNTDVAQ IDKDSEASNT EVSSNESTTT NESDKEAQTE KVNTLDSDIN TSPKTVQVYK 420
  421 NDATPKLRMT RSVSTPTIAT RSAVTKESTT KSSLPKYTPK VNSSINNYIR KNNFKAPNYE 480
  481 QDIASYLPKY QYRYGKPEGI VMHDTANDNS TITGEINYMK NNYNSAFVHA YVDGNRIIET 540
  541 ANTDYLAWGA GPAANDRFIH VELVHTHDYD SFARSITNYA DYAATNLQYY GLAPDSAEYD 600
  601 GVGTVWTHKA VSNYLGGSDH IDPHGYLANH NYSYDELYDL IYEKYLIKTG KAAAWGTTSS 660
  661 GSTSGSKNES SGSGSTTKPS TNTGKLTVST NNGVGRINTS NDGLYTTVYD QNGKKTSKTN 720
  721 QTLKVTKSAT LGNKNFYLVS DYNKGDLIGW VHQNDVSYNS AKSVVKNNQS YKIKPGEVIY 780
  781 TVPWGTSSQK AGTVSGSSSQ TFKASKQQQI GKTNYVYGTV NNLSGWVSLS KLTSTSKTAT 840
  841 SPTTNNHLTV NTLTNQQGTV AKTNHGVYTS VYDKKGVQKS YVNGKTYKLS KKATLGNNSF 900
  901 YLITDNKTNT NLGWMQTADI TVKEAVTKAT ATATTSVSKI GQLNTNNSGI KTTVYDKKGK 960
  961 NASKFAGRTY TVTKQRTQGN NTYVLIQNTK QNTPIGWVNT KDINTRDLSK TKAKSGQYTV1020
 1021 KATNNGLYAI PWGTKAQQLD TQNNIKNSKF NASKSVFVDK DEYLYGNVNN KTGWISAKDL1080
 1081 NKAQTQSAIT PQKFDYVIYN ANGNYYLDPS VTKSAGSLKG FHESIFTVFE KQIINGVTWY1140
 1141 HGKLSNGKIV WIKESDLRKE LVKYYKSNLT LDQAVALQHG LKFKPQIQRT PGKWEDATTS1200
 1201 EIKNAMNSSK LAKDPTQKYQ FLRLDKSQNI SGTDLDKLLV GKGILEGQGE AFSEAAKTYN1260
 1261 INEVYLVSHA LLETGNGTSK LANGGDVVNN KVVTNGAKKY YNMFGIGAVD KDPVKQGFAT1320
 1321 AKNNGWDTVK KAIVGGAKFI ANSYINQGQN TLYKMRWNPD NPGVHQYATD VAWASHNATR1380
 1381 IKGFYDSMNK LGKYFDVNTY K

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle