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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PSCA_DICDI
Protein type: Globular with Signal Peptide
Type Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNYKIITLL LIISILFNII RSNKISLKDS DSGSNGNQDI QILINDILNN CSSSESSSCF  60
   61 GTQWGVVADI YTPSNGEFTN IFSLNELQAF TPASNTKLFT TISIFYTFGE DFKVFTPFFT 120
  121 DKPFNSVSGG SSNSELDFIC VKGMGDPSMS IDNLIEAAKF FSSNPTMKKV NKLLLDTSFY 180
  181 NIGNGVDGNI PSAWEWEDLT STYGSIPTPL IINENTMDIY ITPSNVIGGK PTASFKYSGE 240
  241 DKYLPVIILA TTTTTSNSST STLNYSFKMS SQSIYITGNC DINGGIQIIT VPILDPEQYF 300
  301 LTVFSALLED GGVEISQTAI GSCNYTGMDY KSFEVISPEL SEMLNYTLLT SNNLYAETFL 360
  361 RQMGTFNSAA SESTPTYQAG LEYIQQTLSI PTSLYTQVDG SGLSRNNFIT PKSLITVIEN 420
  421 VYTNVGDPQH DYISYLPVAS LSGTLSKRFI NTPASGIVHA KTGSMTGVNS LTGVILPNGL 480
  481 SDDQQNSIFF SIIANNSPAQ NTDIIDIIDQ IVILLTKFIL SS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle