YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	LYSD_DICDI
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLLVTLILL IFVLTVSGQY SCSNPCYGNM CCSIPSNNEY YLTTFCDEST ACGTPCSAQT  60
   61 YFTADSQRFG CGVTLTICST SGGSTTTGGT GSAGTSTSSG SGSGSGSGSG SGSGSGSGTS 120
  121 GSSSSGSSSG SGSGSSSGSG GSSGSGSGST METGGFYGVC VKAITIDAGP NISVEEEAGM 180
  181 AIIDASSQIC QDLFGSSSCG WSDKRSITAV QSSVEDGFPV NKPFNVTFED YNKIISNSLI 240
  241 LDQQCSNKNN CKYNKLELMK

Type	Start	End	Confidence
Signal Peptide	1	18	0.99
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	260	0.99