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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PDE4_DICDI
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIIYYFLIIL FLIIKDVLIS LLFFASCLCI FLQSGIPDLR KHIVIFCIIF MINYGCCILF  60
   61 MDWFYIDTTG TKPYRGRILA TKIHWGEEAT ILVSMALLGC IFIVLEKFIK SYARCVAEQH 120
  121 YQIQCLQKEK EKLQTEINIS LKKLDLDTPI EKIMDILRSM INTSESENDK KQLIKVIAVL 180
  181 GSNKLYDPDF KFETCTDDAE VYSWLQSMLN REVGYSNVNN NNNMMMIENN NNNTIINNNL 240
  241 IEPTSPNFSK KLTSSDLIPR IRSMPEITDQ GIQELIINNF LEWDFPVFQL SEITDGNPLF 300
  301 YMSYFLFSRH KFFEKFKIGI DCFKNFMRKI ESGYDSTNPY HNSIHATDVL HNLNYFIEKS 360
  361 FGKFLTDIEL FSMILAAIIH DFKHPGVNNH FQINSKSRLA LKYNDKSILE NYHLHQAFII 420
  421 MNEPESGILL KLSDSVRKEI RETIIALVLS TDMAKHFNLV GRFKSMANSF PTTTNTQQPS 480
  481 SSSSSSSSTT IPTSTITPTP NSTTSTTTTT TTTTTTTNNN NNNNSNNNSL NNIINNCSSS 540
  541 NGSMGASGAD NSNSNNTNNS NSNNQNQCGS SIFLNSNKKD RLLLMKISIK CADISNPSKP 600
  601 WNLYTNWSNR VTSEFYKQGD KEKESNMDVS AFMDRNKPAT TKCQINFINI FVAPIYEIWS 660
  661 HHFPQFKLCY QNILSNLSRL EIEQQQQLQL QQQQQQQLQQ QQQQQQQIHQ QQQQQLHHHQ 720
  721 QQQQFQHQQH QQQLQHQHQQ QLNNQNQNQN QSNSNNSNSF GLTQSNYLIV V

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle