YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|4586230
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKITLLSAV CLLFTLNHSA NALVSSPSTL NPGTNVAKLA EQAPVHWVSV AQIENSLTGR  60
   61 PPMAVGFDID DTVLFSSPGF WRGKKTYSPD SDDYLKNPAF WEKMNNGWDE FSIPKEVARQ 120
  121 LIDMHVRRGD SIYFVTGRSQ TKTETVSKTL ADNFHIPAAN MNPVIFAGDK PGQNTKVQWL 180
  181 QEKNMRIFYG DSDNDITAAR DCGIRGIRIL RAANSTYKPL PQAGAFGEEV IVNSEY

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	236	0.99