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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: BAMA_PHOLU
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMKKLLIAS LLFGSAAAYG ADGFVVQDIH FEGLQRVAVG AALLNMPVRV GDTVSDEDIG  60
   61 RTIHALFATG NFEDVRVLRD GNTLIVQVKE RPTIASITFS GNKSVKDDML KQNLEASHVR 120
  121 VGEALDRTML SNIERGLEDF YYSVGKYNAS VKAVVTPLPR NRVDLKLVFA EGVSAKIQQI 180
  181 NIVGNKSFSS DELLNRFQLR DDVPWWNLTA DQKYQKQKLT GDLEALRSFY LDRGYARFNI 240
  241 DSTQVSLTPD KKGIYVTINM TEGDQYKISG IDLNGNMAGY QSEITKLAAI EPGSLYNGTQ 300
  301 VTKMENDIKN LLGRYGYAYP RVMTQPEIND QDKTVKLHVN IDAGNRFYVR KIRFSGNDTT 360
  361 KDSVLRREMR QMERAWLGSD LVELGKERLN RLGYFETVDV ETQRIPGSPD QVDVVYKVKE 420
  421 RNTGSLNFGV GFGTESGVSF QIGAQQDNWL GTGNAVGINA SKNDYSTYAE LSFTDPYFTI 480
  481 NGVSLGGRVF YNDFRADDAE LSGYTNQSYG ISGFLGFPIN ENNSLNFGLN YIHNSLSDML 540
  541 PQVAMWRYLR SMGEKPDLES KAEFKADDFA LTMGWTYNNL DRGFFPTSGV KSTLNGKVTI 600
  601 PGSDNEFYKV TLDTSAYYPI NDDRTWVILG RSRLGYGDGL GGKELPFYEN FYAGGSSTVR 660
  661 GFRSNNIGPK AIYLYKDGSP KKESPSRDAV GGNAMAVASL ELITPTPFLD SKYSNSVRTS 720
  721 FFIDSGTVWD TDWNDSAVMK SKGIPDYSKP GNIRVSAGIA LQWMSPLGPL VFSYAKPIKD 780
  781 YEGDRSEQFQ FNIGKTW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle