YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|14970551
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTMRKVTIG LALGSGAAKG WAHIGVLKAL EDLGIVPDVV AGCSVGALVG AAYATHRLDS  60
   61 MAHWVSGFRY WDVIRLMDFS WRRGGLLRGD RVFNHVKHLL RTQHIEECAI KYGAVATNLS 120
  121 TGRELWLTQG DLHLAIRASC SMPGLLSPVQ FNGYWLVDGA VVNPIPVSLT RAMGADVVIA 180
  181 VDLQHDASLL PHNLLSTRPA VQAEEIAAPH GWRQRLRSRL SHRFRRQTEA TPTAMEIMST 240
  241 SIQILENRLK MNRMAGDPPD VLIQPYCPQI ATLDFHRAEE AIESGRLAVE KQLELLLPLV 300
  301 NHGV

Type	Start	End	Confidence
Signal Peptide	1	22	0.89
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	304	0.96