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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|1360957, gi|8...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGNDREPIG RKGKPSRPVK QKVSRRQLRD EEYDDDYDDD DYEDEEPMPR KGKGKGRKPR  60
   61 GKRGWFWLLV KLSIVFLVLI AIYGVYLDQK IRSRIDGKVW QLPAAVYGRM VNLEPEMPIG 120
  121 KNEMVELLEA TQYRQVTKMT RPGEFTVQAK SIEMIRRPFD FPDSKEGQVR ARLTFDGDHL 180
  181 DTIENMDNNR QFGFFRLDPR LITMLSSPNG EQRLFVPRSG FPDLLVDTLL ATEDRHFYEH 240
  241 DGISLYSIGR AVLANLTAGR TVQGASTLTQ QLVKNLFLSS ERSYWRKANE AYMALIMDAG 300
  301 YSKDRILELY MNEVYLGQSG DNEIRGFPLA SLYYFGRPVE ELSLDQQALL VGMVKGASIY 360
  361 NPWRNPKLAL ERRNLVLRLL QQQQIIDQDL YDMLSARPLG VQPRGGVISP QPAFMQMVRQ 420
  421 ELQAKLGDKV KDLSGVKIFT TFDSVAQDAA EKAAVEGIPV LKKQRKLSDL ETAIVVVDRF 480
  481 SGEVRAMVGG AEPQFAGYNR AMQARRSIGS LAKPATYLTA LSQPKLYRLN TWIRHAPIAL 540
  541 RQPNGQVWSP QNDDRRYSET GKVMLVDALT RSMNVPTVNL GMALGLPAVT DTWLKLGAPK 600
  601 DQLNPVPAML LGALNLTPIE VAQAFQTIAS GGNRAPLSAL RSVIAEDGTV LYQSFPQAER 660
  661 SVPAQAAYMT LWTMQQVVQR GTGRQLGAKY PGLHLAGKTG TTNNNVDTWF AGIDGSQVTI 720
  721 TWVGRDNNQP TKLYGASGAM SIYQRYLANQ TPTPLVLTPP EDVVDMGVDY DGNFVCSGGM 780
  781 RTLPVWTTDP DSLCQQGEMM QQPTGNPFDQ STPQQQPQQQ QQQPAQQEKK DSDGVAGWIK 840
  841 DMFGSN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle