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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|2126777, gi|39422
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKKVLALAA AITVVAPLQS VAFAHENDGG SKIKIVHRWS AEDKHKEGVN SHLWIVNRAI  60
   61 DIMSRNTTLV KQDRVAQLNE WRTELENGIY AADYENPYYD NSTFASHFYD PDNGKTYIPF 120
  121 AKQAKETGAK YFKLAGESYK NKDMKQAFFY LGLSLHYLGD VNQPMHAANF TNLSYPQGFH 180
  181 SKYENFVDTI KDNYKVTDGN GYWNWKGTNP EEWIHGAAVV AKQDYSGIVN DNTKDWFVKA 240
  241 AVSQEYADKW RAEVTPMTGK RLMDAQRVTA GYIQLWFDTY GDRSSRVDPT DQNNTLKVMT 300
  301 HNVYMLSTNL YPNWGQSQRA DLIGAADYIK NQDVVILNEV FDNSASDRLL GNLKKEYPNQ 360
  361 TAVLGRSNGN EWDKTLGSYS SSTPEDGGVA IVSKWPIVEK IQYVFAKGCG PDNLSNKGFV 420
  421 YTKIKKNDRF VHVIGTHLQA EDSMCGKTSP ASVRTNQLKE IQDFIKNKNI PNDEYVLFGG 480
  481 DMNVNKINAE NNSDSEYASM FKTLHASIPS YTGHTATWDA TTNSIAKYNF PDSPAEYLDY 540
  541 IIASKDHANP SFIENKVLQP KSPQWTVTSW LKKYTYDDYS DHYPVAATIS MK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle