YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|54109967
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LLSGALALTE TWAGSHSMRY FSTTVSRPGR GEPRFISVGY VDDTQFVRFD SDAESPRMEP  60
   61 RAPWMEQEGP EYWDRNTRKA KAHAQTDRVD LETLRGYYNQ SEGGSHTIQM MYGCDLGPDG 120
  121 RLLRGYRQDA YDGKDYIALN EDLRSWTAAD MAAQNTQRKW EAAGVAEQRR AYLEGLCLES 180
  181 LRRYLENGKE RLQRADPPKT HVTHHPISDH EATLRCWALG FYPAEITLTW QRDGEEQTQD 240
  241 TEFVETRPGG DGTFQKWGAV VVPSGEEQRY TCHVQHEGLP EPLTLRWEPS SQSTIAIVGI 300
  301 VVGLAVLAVV VTGAVVAAVM WRRKSSGGKG GSYSQAASND SAQGSDVSLT A

Type	Start	End	Confidence
Non-Cytoplasmic	1	294	0.98
Transmembrane Helix	295	319	0.93
Cytoplasmic	320	351	0.96