YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|1621212
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRTLFGTVA AGIMIFGTLA APLPPAANAQ SFTLNEPSQT ITFSPLQLQN ETSAQQAKTA  60
   61 ATSQIDSYYQ SANGKSGPAL KKALHDIIDD HKQLSYSQVW DALKKTDEDP KNPSNVLLLY 120
  121 SGVSRSKQAN GGNVGQWNRE HVWAKSHGNF GTSQGPGTDL HHLRATDVQT NSTRGNLDFD 180
  181 LGGNEYKGAP GNFYDSDSFE PHSRVKGDVA RMLFYMAVRY EGDDRFPDLE LNDKVNNGSA 240
  241 PLHGKMSVLL KWHKQDPVDQ IERNRNEIIY ETYQNNRNPF IDHPEWASAI WE

Type	Start	End	Confidence
Signal Peptide	1	29	0.98
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	292	0.99