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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SLAP_BACTF
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKTNSYKKV IAGTMTAAMV AGVVSPVAAA GKSFPDVPAD HWGIDSINYL VEKGAVTGND  60
   61 KGMFEPGKEL TRAEAATMMA QILNLPIDKD AKPSFADSQG QWYTPFIAAV EKAGVIKGTG 120
  121 NGFEPNGKID RVSMASLLVE AYKLDTKVNG TPATKFKDLE TLNWGKEKAN ILVELGISVG 180
  181 TTADKWEPKK TVTKAEAAQF IAKTDKQFGT EVAKVESAKA VTTQKVEVKF SKAVEKLTKE 240
  241 DVKLANKANN DKVLVKDVKL SEDKKSATVE LYSNLAAKQT YTVDVNKVGK VEVTVGSLEA 300
  301 KTIEMADQTV VADEPTALKY TVKDENGTEV VSPAGIEFVT PAAEKINAKG EITLAKGTST 360
  361 TVKAVYKKDG KVVAESKEVK VSAEGTAVAS ISNWTVAAEK ADFTSKDFKQ NDKVYEGDNV 420
  421 SVQVELKDQF NNVVNNVKAE YESLNTEVAV VDKATGKVTV LSAGKAPVKV TVKDSKGKEL 480
  481 VSKTVEIEAF AQKAMKEIKL EKTNVALSTK DVTDFKVKAP VLDQYGKEFA APVEVKVLDK 540
  541 DGKELKEQKL VAKYENKELV LNAHGQEAGK YTVELTAKSG KKEVKSKLAL ELKAPGVFSK 600
  601 FDVRGLENEL DKYVTEENKK NEMVVSVLPV DANGLVLREK EAATLKVTTT DKDGKVVDAT 660
  661 SGQVAVNDAA GTITVGNEAK AGETYKVTVV ADGKLITTHS FKVVDTAPAA KKLAVDFTST 720
  721 SLNEVAQGSE LKTALLNILS VDGVPATTAG ATVTDVKFVS ADTNVVSEET AKFGTKGSTS 780
  781 IFVKELTVKK GEQTQKVELD KPVRVDVSIK EVKEVK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle